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"Title": "An R Interface to Open-Access Malaria Data, Hosted by the\n'Malaria Atlas Project'",
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"Description": "A suite of tools to allow you to download all publicly\navailable parasite rate survey points, mosquito occurrence\npoints and raster surfaces from the 'Malaria Atlas Project'\n servers as well as utility\nfunctions for plotting the downloaded data.",
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"listPoints",
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"listPRPointVersions",
"listRaster",
"listShp",
"listShpVersions",
"listSpecies",
"listVecOccPointCountries",
"listVecOccPointVersions"
],
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{
"page": "as.MAPraster",
"title": "Convert Raster objects into MAPraster objects",
"topics": [
"as.MAPraster"
]
},
{
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"title": "Convert SpatialPolygon objects into MAPshp objects",
"topics": [
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]
},
{
"page": "as.pr.points",
"title": "Convert data.frames to pr.points objects.",
"topics": [
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]
},
{
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]
},
{
"page": "autoplot_MAPraster",
"title": "Quickly visualise Rasters downloaded from MAP",
"topics": [
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]
},
{
"page": "autoplot.default",
"title": "Default autoplot method",
"topics": [
"autoplot.default"
]
},
{
"page": "autoplot.MAPraster",
"title": "Quickly visualise Rasters downloaded from MAP",
"topics": [
"autoplot.MAPraster"
]
},
{
"page": "autoplot.MAPshp",
"title": "Create a basic plot to visualise downloaded shapefiles",
"topics": [
"autoplot.MAPshp"
]
},
{
"page": "autoplot.pr.points",
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"topics": [
"autoplot.pr.points"
]
},
{
"page": "autoplot.sf",
"title": "Create a basic plot to visualise downloaded shapefiles",
"topics": [
"autoplot.sf"
]
},
{
"page": "autoplot.SpatRaster",
"title": "Quickly visualise Rasters downloaded from MAP",
"topics": [
"autoplot.SpatRaster"
]
},
{
"page": "autoplot.SpatRasterCollection",
"title": "Quickly visualise Rasters downloaded from MAP",
"topics": [
"autoplot.SpatRasterCollection"
]
},
{
"page": "autoplot.vector.points",
"title": "Create a basic plot showing locations of downloaded Vector points",
"topics": [
"autoplot.vector.points"
]
},
{
"page": "convertPrevalence",
"title": "convert prevalences from one age range to another",
"topics": [
"convertPrevalence"
]
},
{
"page": "download_rst",
"title": "Download rasters from the MAP geoserver to a specifed location. If file already exists it will read it instead.",
"topics": [
"download_rst"
]
},
{
"page": "extractRaster",
"title": "Extract pixel values from MAP rasters using point coordinates.",
"topics": [
"extractRaster"
]
},
{
"page": "fillDHSCoordinates",
"title": "Add DHS locations to malaria data",
"topics": [
"fillDHSCoordinates"
]
},
{
"page": "getMaskBand",
"title": "Get mask band for masked raster.",
"topics": [
"getMaskBand"
]
},
{
"page": "getPR",
"title": "Download PR points from the MAP database",
"topics": [
"getPR"
]
},
{
"page": "getRaster",
"title": "Download Rasters produced by the Malaria Atlas Project",
"topics": [
"getRaster"
]
},
{
"page": "getShp",
"title": "Download MAPadmin2013 Administrative Boundary Shapefiles from the MAP geoserver",
"topics": [
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]
},
{
"page": "getSpBbox",
"title": "Return sp style bbox",
"topics": [
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]
},
{
"page": "getVecOcc",
"title": "Download Vector Occurrence points from the MAP database 'getVecOcc' downloads all publicly available vector occurrence points for a specified country (or countries) and returns this as a dataframe. 'country' and 'ISO' refer to countries and a lower-level administrative regions such as French Guiana.",
"topics": [
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]
},
{
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"title": "Available data to download from the MAP geoserver.",
"topics": [
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]
},
{
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"topics": [
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},
{
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{
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},
{
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"title": "Deprecated function. Please instead use listPRPointCountries for pr points, listVecOccPointCountries for vector points, listRaster for raster and listShp for shape.",
"topics": [
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]
},
{
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"title": "Deprecated function. Please instead use listPRPointCountries for pr points, and listVecOccPointCountries for vector points",
"topics": [
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]
},
{
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"title": "List countries where there is pr point data available",
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},
{
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"title": "List all dataset versions from the Web Feature Services provided by the Malaria Atlas Project within the Parasite Rate workspace.",
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{
"page": "listRaster",
"title": "List all MAP Rasters available to download.",
"topics": [
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},
{
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"title": "List administrative units for which shapefiles are stored on the MAP geoserver.",
"topics": [
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},
{
"page": "listShpVersions",
"title": "List all versions of admin unit shapes from the Web Feature Services provided by the Malaria Atlas Project within the Admin Units workspace.",
"topics": [
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},
{
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"title": "list all species which have occurrence data within the MAP database.",
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]
},
{
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{
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},
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"title": "An R interface to open-access malaria data, hosted by the Malaria Atlas Project.",
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